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1

How to make large self-organizing maps for nonvectorial data

Teuvo Kohonen, Panu Somervuo

Journal:

Neural Networks

Year:

2002

Language:

english

File:

PDF, 3.23 MB

english, 2002

2

Self-Organizing Maps and Learning Vector Quantization for Feature Sequences

Panu Somervuo, Teuvo Kohonen

Journal:

Neural Processing Letters

Year:

1999

Language:

english

File:

PDF, 280 KB

english, 1999

3

Self-organizing maps of symbol strings

Teuvo Kohonen, Panu Somervuo

Journal:

Year:

1998

Language:

english

File:

PDF, 197 KB

english, 1998

4

Give me a sample of air and I will tell which species are found from your region - molecular identification of fungi from airborne spore samples

Abrego, Nerea, Norros, Veera, Halme, Panu, Somervuo, Panu, Ali-Kovero, Heini, Ovaskainen, Otso

Journal:

Molecular Ecology Resources

Year:

2018

Language:

english

File:

PDF, 643 KB

english, 2018

5

Online algorithm for the self-organizing map of symbol strings

Panu J. Somervuo

Journal:

Neural Networks

Year:

2004

Language:

english

File:

PDF, 477 KB

english, 2004

6

Redundant Hash Addressing of Feature Sequences Using the Self-Organizing Map

Journal:

Neural Processing Letters

Year:

1999

Language:

english

File:

PDF, 57 KB

english, 1999

7

Expression of multiple nebulin isoforms in human skeletal muscle and brain

Jenni Laitila, Mubashir Hanif, Anders Paetau, Sari Hujanen, Joni Keto, Panu Somervuo, Sanna Huovinen, Bjarne Udd, Carina Wallgren-Pettersson, Petri Auvinen, Peter Hackman, Katarina Pelin

Journal:

Year:

2012

Language:

english

File:

PDF, 672 KB

english, 2012

8

Arabidopsis NAC45/86 direct sieve element morphogenesis culminating in enucleation

Furuta, K. M., Yadav, S. R., Lehesranta, S., Belevich, I., Miyashima, S., Heo, J.-o., Vaten, A., Lindgren, O., De Rybel, B., Van Isterdael, G., Somervuo, P., Lichtenberger, R., Rocha, R., Thitamadee,

Journal:

Year:

2014

Language:

english

File:

PDF, 3.11 MB

english, 2014

9

Evaluation of a diagnostic microarray for the detection of major bacterial pathogens of potato from tuber samples

Degefu, Y., Somervuo, P., Aittamaa, M., Virtanen, E., Valkonen, J. P. T.

Journal:

Year:

2016

Language:

english

File:

PDF, 400 KB

english, 2016

10

Preliminary study of ion mobility based electronic nose MGD-1 for discrimination of hard cheeses

Oguz Gursoy, Panu Somervuo, Tapani Alatossava

Journal:

Journal of Food Engineering

Year:

2009

Language:

english

File:

PDF, 367 KB

english, 2009

11

Comparison of transgenicGerbera hybridalines and traditional varieties shows no differences in cytotoxicity or metabolic fingerprints

Miia Marika Ainasoja, Leena Lyydia Pohjala, Päivi Sirpa Marjaana Tammela, Panu Juhani Somervuo, Pia Maarit Vuorela, Teemu Heikki Teeri

Journal:

Transgenic Research

Year:

2008

Language:

english

File:

PDF, 263 KB

english, 2008

12

Relatedness of human tissues from gene expression meta-analysis

D. Greco, P. Somervuo, A. Di Lieto, E. Castren, P. Auvinen

Journal:

New Biotechnology

Year:

2010

Language:

english

File:

PDF, 75 KB

english, 2010

13

Distinguishing bacterial pathogens of potato using a genome-wide microarray approach

M. AITTAMAA, P. SOMERVUO, M. PIRHONEN, L. MATTINEN, R. NISSINEN, P. AUVINEN, J. P. T. VALKONEN

Journal:

Molecular Plant Pathology

Year:

2008

Language:

english

File:

PDF, 1.51 MB

english, 2008

14

Microarray-based comparison of genetic differences between strains of Streptomyces turgidiscabies with focus on the pathogenicity island

MARJA AITTAMAA, PANU SOMERVUO, INTO LAAKSO, PETRI AUVINEN, JARI P. T. VALKONEN

Journal:

Molecular Plant Pathology

Year:

2010

Language:

english

File:

PDF, 662 KB

english, 2010

15

Species' identification and microarray-based comparative genome analysis of Streptomyces species isolated from potato scab lesions in Norway

MERETE W. DEES, PANU SOMERVUO, ERIK LYSØE, MARJA AITTAMAA, JARI P. T. VALKONEN

Journal:

Molecular Plant Pathology

Year:

2012

Language:

english

File:

PDF, 1.73 MB

english, 2012

16

Differential gene expression in senescing leaves of two silver birch genotypes in response to elevated CO2 and tropospheric ozone

SARI KONTUNEN-SOPPELA, JOHANNA RIIKONEN, HANNA RUHANEN, MIKAEL BROSCHÉ, PANU SOMERVUO, PETRI PELTONEN, JAAKKO KANGASJÄRVI, PETRI AUVINEN, LARS PAULIN, MARKKU KEINÄNEN, ELINA OKSANEN, ELINA VAPAAVUORI

Journal:

Plant, Cell & Environment

Year:

2010

Language:

english

File:

PDF, 289 KB

english, 2010

17

Quickly-released peroxidase of moss in defense against fungal invaders

Mikko T. Lehtonen, Motomu Akita, Nisse Kalkkinen, Elina Ahola-Iivarinen, Gunilla Rönnholm, Panu Somervuo, Mattias Thelander, Jari P. T. Valkonen

Journal:

New Phytologist

Year:

2009

Language:

english

File:

PDF, 2.03 MB

english, 2009

18

Factors underpinning the responsiveness and higher levels of virus resistance realised in potato genotypes carrying virus-specific R genes

A.L. Vuorinen, E. Gammelgård, P. Auvinen, P. Somervuo, S. Dere, J.P.T. Valkonen

Journal:

Annals of Applied Biology

Year:

2010

Language:

english

File:

PDF, 747 KB

english, 2010

19

Microarray profiling of host-extract-induced genes and characterization of the type VI secretion cluster in the potato pathogen Pectobacterium atrosepticum

Mattinen, L., Somervuo, P., Nykyri, J., Nissinen, R., Kouvonen, P., Corthals, G., Auvinen, P., Aittamaa, M., Valkonen, J. P. T., Pirhonen, M.

Journal:

Microbiology (Society for General Microbiology)

Year:

2008

Language:

english

File:

PDF, 472 KB

english, 2008

20

PCR assay for differentiating between Group I (proteolytic) and Group II (nonproteolytic) strains of Clostridium botulinum

Elias Dahlsten, Hannu Korkeala, Panu Somervuo, Miia Lindström

Journal:

International Journal of Food Microbiology

Year:

2008

Language:

english

File:

PDF, 158 KB

english, 2008

21

cspB encodes a major cold shock protein in Clostridium botulinum ATCC 3502

H. Söderholm, M. Lindström, P. Somervuo, J. Heap, N. Minton, J. Lindén, H. Korkeala

Journal:

International Journal of Food Microbiology

Year:

2011

Language:

english

File:

PDF, 562 KB

english, 2011

22

Role of flhA and motA in growth of Listeria monocytogenes at low temperatures

Mirjami Mattila, Miia Lindström, Panu Somervuo, Annukka Markkula, Hannu Korkeala

Journal:

International Journal of Food Microbiology

Year:

2011

Language:

english

File:

PDF, 469 KB

english, 2011

23

Parametric Representations of Bird Sounds for Automatic Species Recognition

Somervuo, P., Harma, A., Fagerlund, S.

Journal:

IEEE Transactions on Audio Speech and Language Processing

Year:

2006

Language:

english

File:

PDF, 944 KB

english, 2006

24

Broadband Matching of a Parametric Amplifier by Using Fano's Method (Correspondence)

Porra, V., Somervuo, P.

Journal:

IEEE Transactions on Microwave Theory and Techniques

Year:

1968

Language:

english

File:

PDF, 504 KB

english, 1968

25

Sequencing of Virulence Genes Shows Limited Genetic Variability in Yersinia pseudotuberculosis

Palonen, Eveliina, Kangas, Susanna, Somervuo, Panu, Lindström, Miia, Fredriksson-Ahomaa, Maria, Skurnik, Mikael, Korkeala, Hannu

Journal:

Foodborne Pathogens & Disease

Year:

2013

Language:

english

File:

PDF, 196 KB

english, 2013

26

Phenotypic and transcriptomic analyses of Sigma L-dependent characteristics in Listeria monocytogenes EGD-e

Mirjami Mattila, Panu Somervuo, Thomas Rattei, Hannu Korkeala, Roger Stephan, Taurai Tasara

Journal:

Food Microbiology

Year:

2012

Language:

english

File:

PDF, 851 KB

english, 2012

27

Comparison of Clostridium botulinum genomes shows the absence of cold shock protein coding genes in type E neurotoxin producing strains

Söderholm, Henna, Jaakkola, Kaisa, Somervuo, Panu, Laine, Pia, Auvinen, Petri, Paulin, Lars, Lindström, Miia, Korkeala, Hannu

Journal:

The Botulinum J

Year:

2013

Language:

english

File:

PDF, 371 KB

english, 2013

28

Protein Secretome of Moss Plants ( Physcomitrella patens ) with Emphasis on Changes Induced by a Fungal Elicitor

Lehtonen, Mikko T., Takikawa, Yoshihiro, Rönnholm, Gunilla, Akita, Motomu, Kalkkinen, Nisse, Ahola-Iivarinen, Elina, Somervuo, Panu, Varjosalo, Markku, Valkonen, Jari P. T.

Journal:

Journal of Proteome Research

Year:

2014

Language:

english

File:

PDF, 440 KB

english, 2014

29

Quickly-Released Peroxidase of Moss in Defense against Fungal Invaders

Mikko T. Lehtonen, Motomu Akita, Nisse Kalkkinen, Elina Ahola-Iivarinen, Gunilla Rönnholm, Panu Somervuo, Mattias Thelander and Jari P. T. Valkonen

Journal:

New Phytologist

Year:

2009

Language:

english

File:

PDF, 3.12 MB

english, 2009

30

Global gene expression in the common scab pathogen, Streptomyces scabies , exposed to potato microtubers

Dees, M.W., Lysøe, E., Brurberg, M.B., Somervuo, P., Almvik, M., Valkonen, J.P.T.

Journal:

Annals of Applied Biology

Year:

2014

Language:

english

File:

PDF, 869 KB

english, 2014

31

[IEEE 2000 International Conference on Acoustics, Speech and Signal Processing - Istanbul, Turkey (5-9 June 2000)] 2000 IEEE International Conference on Acoustics, Speech, and Signal Processing. Proceedings (Cat. No.00CH37100) - Speech recognition using temporally connected kernels in mixture density hidden Markov models

Year:

2000

Language:

english

File:

PDF, 367 KB

english, 2000

32

Simple method of determining the external signal voltage in Josephson junctions

Somervuo, P., Sirkeinen, Y.

Journal:

Journal of Applied Physics

Year:

1975

Language:

english

File:

PDF, 384 KB

english, 1975

33

[IEEE 2004 IEEE International Conference on Acoustics, Speech, and Signal Processing - Montreal, Que., Canada (17-21 May 2004)] 2004 IEEE International Conference on Acoustics, Speech, and Signal Processing - Bird song recognition based on syllable pair histograms

Somervuo, P., Harma, A.

Year:

2004

Language:

english

File:

PDF, 301 KB

english, 2004

34

[IEEE 2004 IEEE International Conference on Acoustics, Speech, and Signal Processing - Montreal, Que., Canada (17-21 May 2004)] 2004 IEEE International Conference on Acoustics, Speech, and Signal Processing - Classification of the harmonic structure in bird vocalization

Harma, A., Somervuo, P.

Year:

2004

Language:

english

File:

PDF, 301 KB

english, 2004

35

Comparative Genomic Hybridization Analysis of Two Predominant Nordic Group I (Proteolytic) Clostridium botulinum Type B Clusters

Lindstrom, M., Hinderink, K., Somervuo, P., Kiviniemi, K., Nevas, M., Chen, Y., Auvinen, P., Carter, A. T., Mason, D. R., Peck, M. W., Korkeala, H.

Journal:

Applied and Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 402 KB

english, 2009

36

Involvement of Two-Component System CBO0366/CBO0365 in the Cold Shock Response and Growth of Group I (Proteolytic) Clostridium botulinum ATCC 3502 at Low Temperatures

Lindstrom, M., Dahlsten, E., Soderholm, H., Selby, K., Somervuo, P., Heap, J. T., Minton, N. P., Korkeala, H.

Journal:

Applied and Environmental Microbiology

Year:

2012

Language:

english

File:

PDF, 477 KB

english, 2012

37

Progressive Loss of Cones in Achromatopsia: An Imaging Study Using Spectral-Domain Optical Coherence Tomography

Thiadens, Alberta A. H. J., Somervuo, Ville, van den Born, L. Ingeborgh, Roosing, Susanne, van Schooneveld, Mary J., Kuijpers, Robert W. A. M., van Moll-Ramirez, Norka, Cremers, Frans P. M., Hoyng, Ca

Journal:

Investigative Ophthalmology & Visual Science

Year:

2010

Language:

english

File:

PDF, 938 KB

english, 2010

38

Requirement for RNA Helicase CsdA for Growth of Yersinia pseudotuberculosis IP32953 at Low Temperatures

Palonen, E., Lindstrom, M., Somervuo, P., Johansson, P., Bjorkroth, J., Korkeala, H.

Journal:

Applied and Environmental Microbiology

Year:

2012

Language:

english

File:

PDF, 646 KB

english, 2012

39

Alternative Sigma Factor E Has an Important Role in Stress Tolerance of Yersinia pseudotuberculosis IP32953

Palonen, E., Lindstrom, M., Somervuo, P., Korkeala, H.

Journal:

Applied and Environmental Microbiology

Year:

2013

Language:

english

File:

PDF, 821 KB

english, 2013

40

Significance of Heme-Based Respiration in Meat Spoilage Caused by Leuconostoc gasicomitatum

Jaaskelainen, E., Johansson, P., Kostiainen, O., Nieminen, T., Schmidt, G., Somervuo, P., Mohsina, M., Vanninen, P., Auvinen, P., Bjorkroth, J.

Journal:

Applied and Environmental Microbiology

Year:

2013

Language:

english

File:

PDF, 251 KB

english, 2013

41

Important Role of Class I Heat Shock Genes hrcA and dnaK in the Heat Shock Response and the Response to pH and NaCl Stress of Group I Clostridium botulinum Strain ATCC 3502

Selby, K., Lindstrom, M., Somervuo, P., Heap, J. T., Minton, N. P., Korkeala, H.

Journal:

Applied and Environmental Microbiology

Year:

2011

Language:

english

File:

PDF, 975 KB

english, 2011

42

The Cold-Induced Two-Component System CBO0366/CBO0365 Regulates Metabolic Pathways with Novel Roles in Group I Clostridium botulinum ATCC 3502 Cold Tolerance

Dahlsten, E., Zhang, Z., Somervuo, P., Minton, N. P., Lindstrom, M., Korkeala, H.

Journal:

Applied and Environmental Microbiology

Year:

2014

Language:

english

File:

PDF, 13.49 MB

english, 2014

43

The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera

Ahola, Virpi, Lehtonen, Rainer, Somervuo, Panu, Salmela, Leena, Koskinen, Patrik, Rastas, Pasi, Välimäki, Niko, Paulin, Lars, Kvist, Jouni, Wahlberg, Niklas, Tanskanen, Jaakko, Hornett, Emily A., Ferg

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 1.05 MB

english, 2014

44

Differential Isoform Expression and Selective Muscle Involvement in Muscular Dystrophies

S. Huovinen, S. Penttilä, P. Somervuo, J. Keto, P. Auvinen, A. Vihola, S. Huovinen, K. Pelin, O. Raheem, J. Salenius, T. Suominen, P. Hackman, B. Udd

Year:

2015

Language:

english

File:

PDF, 1.28 MB

english, 2015

45

Flight-induced changes in gene expression in the Glanville fritillary butterfly

Kvist, Jouni, Mattila, Anniina L. K., Somervuo, Panu, Ahola, Virpi, Koskinen, Patrik, Paulin, Lars, Salmela, Leena, Fountain, Toby, Rastas, Pasi, Ruokolainen, Annukka, Taipale, Minna, Holm, Liisa, Auv

Journal:

Molecular Ecology

Year:

2015

File:

PDF, 344 KB

2015

46

SANSparallel: interactive homology search against Uniprot

Somervuo, Panu, Holm, Liisa

Journal:

Nucleic Acids Research

Year:

2015

Language:

english

File:

PDF, 1.65 MB

english, 2015

47

Flight-induced changes in gene expression in the Glanville fritillary butterfly

Kvist, Jouni, Mattila, Anniina L. K., Somervuo, Panu, Ahola, Virpi, Koskinen, Patrik, Paulin, Lars, Salmela, Leena, Fountain, Toby, Rastas, Pasi, Ruokolainen, Annukka, Taipale, Minna, Holm, Liisa, Auv

Journal:

Molecular Ecology

Year:

2015

Language:

english

File:

PDF, 344 KB

english, 2015

48

[IEEE Proceeding of Fourth International Conference on Spoken Language Processing. ICSLP '96 - Philadelphia, PA, USA (3-6 Oct. 1996)] Proceeding of Fourth International Conference on Spoken Language Processing. ICSLP '96 - Using the self-organizing map to speed up the probability density estimation for speech recognition with mixture density HMMs

Kurimo, M., Somervuo, P.

Year:

1996

Language:

english

File:

PDF, 455 KB

english, 1996

49

[IEEE International Conference on Neural Networks - Washington, DC, USA (10-16 July 1999)] IJCNN'99. International Joint Conference on Neural Networks. Proceedings (Cat. No.99CH36339) - Time topology for the self-organizing map

Year:

1999

File:

PDF, 567 KB

1999

50

[IEEE International Conference on Neural Networks - Washington, DC, USA (10-16 July 1999)] IJCNN'99. International Joint Conference on Neural Networks. Proceedings (Cat. No.99CH36339) - Time topology for the self-organizing map

Year:

1999

Language:

english

File:

PDF, 567 KB

english, 1999

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